Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945532.1_cds_XP_016488009.1_78687
CDS Infomation

[gene=LOC107808042] [db_xref=GeneID:107808042] [protein=GDSL esterase/lipase At3g48460-like] [protein_id=XP_016488009.1] [location=join(15005..15665,16531..17111,18062..18568)] [gbkey=CDS]
Sequence

ATGTTGTTCCCACATCTTCCTCTTACCCTATTCTTCTGTTTCTGCCTGTTTTTCTCGTTT
TCATATGCTCATTACAAGCCCCCTTGTGATTGTTCCTCTGCTCATAACAATAGCCATGAA
AACATTCCCACTAACCCTGGTAATTCATTCCCTGCTCATAACAACAGCCACGAAAATATT
CCAACCAAGCCTGGAAATTCTTTCCCTGCTCAAAACAACAGCCATGAAAATATTCCAACC
AAGCCTGGAAATTCTTTCCCTGCTCAAAACAACAGCCATGAAAATATTCCAACCAAGCCT
GGAAATTCTTTCCCTGCTCAAAACAACAGCCATGAAAATATTCCAACCAAGCCTGGAAAT
TCTTTCCCTGCTCAAAACAACAGCCATGAAAATATTCCAACCAAGCCTGGAAATTCTTTC
CCTGCTCAAAACAACAGCCATGAAAATATTCCAACCAAGCCTGGAAATTCTTTCCCTGCT
CAAAACAACAGCCATGAAAATATTCCAACCAAGCCTGGAAATTCTTTCCCTGCTCAAAAC
AACAGCCATGAAATTCCCAGTAACTCTTCCCCTGCTCTAAATAACAGCCATGAAATTCCA
ACCAAGCCTGGTAATTCATTCCCACCTCATAATAACAGCCATGAATTTCCCACCAAGCCT
GGTAACTCTTCCCCTGCTCAAGATACTTCCATTAAGCATAATAACTATATAGGATGCTTC
CACAAGGTCTATGCTTTTGGAGATTCCTACACTGATACCGGAAATGCTAAATTAGTGGGT
GATCTCAAGGTAAATTTCACTCAAAGCACGAGCATTTCAGCAAAATCGAAGAATGGTTTA
TGCGATGGGCAGTTGGTGGTAGATTTTCTATGTGATGCTCTTAATCTACCACATTTGCCA
CCCTTCCAAAGTACCTCTATAAATTTCACATCTGGGGTCAATTTTGCAATAGCTGGATCA
ACAATTCTTCCCAAAGAGAAATTCTCGATGCAAAATATTACTAACCTTTTTTGGAAAGGA
ATACCCTTGAACTTTCAAACTCAGATCGATTGGTTCAATAAGTTGAAACAGCAGATGGGA
TGTACAGATAAAACTGGAAAAAGTTGCAAGGCTGAATTGGAGAATGCACTCTTCTGGATA
GGCTCTGTTGGCGTTAGTGACTACGCTCGTATACAAGGGTCCTCTTTACCTACACGTTGG
CTCACACAGCAGTCTGTCGATCAAGTTAGCAGACTAATCGAGGCATTGCTGGGAAGCGGA
GCAAAGTACATCGTAGTTCAAGGATTACCACCAATAGGATGCCTCCCACTACATATCTCA
TTATGTCCACTGAAAGCTGCTCTTGATCATATGGGATGTGCAGCAGCTGTCAACACAGCA
GTAATGGTCCACAACCAGATCCTGCAAAGGAGATTGGAAAGATTCCGTAGATTATATCCT
AATTGTCATATCTTATATGCTGATTACTGGAATGCATATCTAACAATTCTGATGAACTTA
AAGAAGTACCAATTTGAGGAAGCTTTCAAACCTTGCTGTGGAGCTACAGGAGGACCACTC
AACTTCAACTTGCATTCGTTGTGTGGCTCACCTGGTACTGTCAGCTGCAACAATCCTAGC
AAATTTATCAGCTGGGATGGTATCCATCTTACAGAAGCAATGAATCAGAAAGTCACTGAT
CTTTTCCTCAATCAAGGCTTCTGTCAACCATCTTTTAGCGAGCTGGTCAAAAGTAGGAGC
GGGATGTAG

Peptide Sequence

PEP ID

XP_016488009.1
PEP Infomation

PREDICTED: GDSL esterase/lipase At3g48460-like [Nicotiana tabacum]
Sequence

MLFPHLPLTLFFCFCLFFSFSYAHYKPPCDCSSAHNNSHENIPTNPGNSFPAHNNSHENI
PTKPGNSFPAQNNSHENIPTKPGNSFPAQNNSHENIPTKPGNSFPAQNNSHENIPTKPGN
SFPAQNNSHENIPTKPGNSFPAQNNSHENIPTKPGNSFPAQNNSHENIPTKPGNSFPAQN
NSHEIPSNSSPALNNSHEIPTKPGNSFPPHNNSHEFPTKPGNSSPAQDTSIKHNNYIGCF
HKVYAFGDSYTDTGNAKLVGDLKVNFTQSTSISAKSKNGLCDGQLVVDFLCDALNLPHLP
PFQSTSINFTSGVNFAIAGSTILPKEKFSMQNITNLFWKGIPLNFQTQIDWFNKLKQQMG
CTDKTGKSCKAELENALFWIGSVGVSDYARIQGSSLPTRWLTQQSVDQVSRLIEALLGSG
AKYIVVQGLPPIGCLPLHISLCPLKAALDHMGCAAAVNTAVMVHNQILQRRLERFRRLYP
NCHILYADYWNAYLTILMNLKKYQFEEAFKPCCGATGGPLNFNLHSLCGSPGTVSCNNPS
KFISWDGIHLTEAMNQKVTDLFLNQGFCQPSFSELVKSRSGM

Transcript Sequence

Gene sequence data has not been registered.